Preprints
Preprints
*authors contributed equally to this work
✝ Co-corresponding authors
Single-Nucleus Multi-Omic Atlas Maps Regulatory Architecture and Non-Coding Variant Effects across Adult Human Tissues
Kaili Fan*✝, Amrita Sule*, Amy Guillaumet-Adkins, Ruochi Zhang, Tianxiong Yu, Zhijie Cao, Xuting Zhang, Neva Durand, MaryKate Tellier, Laura Domènech, François Aguet, Jason D. Buenrostro✝, Kristin G. Ardlie✝
bioRxiv preprint: https://doi.org/10.64898/2026.09.25.754561. Under reivew @ Nature.
Mapping dynamic epigenetic and transcriptional states across murine immune cells through histone modification profiling
Michael Bale*, Dughan Ahimovic*, Kaili Fan*, Juliana Lee, Andrew Earl, Liang Yang, Matthew Marunde, Alli Hickman, Carolina Lin Windham, Danielle Maryanski, Julie Tellier, Junli Nie, Sara Mostafavi, Stephen Nutt, Michael-Christopher Keogh, Jason Buenrostro, Christophe Benoist, Steven Josefowicz; Immunological Genome Project
In preparation.
The Encyclopedia of DNA Elements
The ENCODE Project Consortium, Timothy E. Reddy.
bioRxiv preprint: https://doi.org/10.64898/2026.07.06.731365; In revision @ Nature.
Transcription factor decoding by the Mediator complex
Si Hoon Park, Lukas Kater, Alessandro Minafra, Alexander Hanzl, Verena Mutzel, Georg Kempf, Tae Kim, Michael Ostrovski, Deyasini Chakraborty, Ana Petracovici, Stefan Schmitt, Joscha Weiss, Alexandra Bendel, Natalie J Zeps, Megan Palacio, Molly Moore, Kaili Fan, Yerin Ko, Jason Moffat, Manuel Carminati, Simone Cavadini, Jason Buenrostro, Dirk Schübeler, Mikko Taipale, Eui Kim, Dylan Taatjes, Luca Giorgetti, Nicolas Thomä
In revision @ Science